Best Prebiotic Enzyme Supplements of 2025

Elisa Drew Avatar
Elisa Drew
Last Updated: Jan 6, 2025

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Prebiotic enzyme supplements are a type of dietary supplement that can help support digestive health. These supplements work by providing the body with the necessary enzymes to break down food and improve nutrient absorption. Prebiotic enzymes are also known to support the growth of healthy gut bacteria, which can further improve digestive function. These supplements come in various forms, including capsules, powders, and liquids, and are typically taken with meals. Many people find that prebiotic enzyme supplements are a helpful addition to their overall wellness routine, particularly if they experience digestive issues such as bloating, gas, or constipation.

At a Glance: Our Top Picks

Physician's CHOICE Digestive Enzymes Cover #TOP 1
Physician's CHOICE Digestive Enzymes
ftb score rating icon 9.9
Zenwise Probiotic Digestive Multi Enzymes Cover #TOP 2
Zenwise Probiotic Digestive Multi Enzymes
ftb score rating icon 9.8
Carlyle Digestive Enzymes with 14 Probiotic Strains Cover #TOP 3
Carlyle Digestive Enzymes with 14 Probiotic Strains
ftb score rating icon 9.6

Top 10 Prebiotic Enzyme Supplements

#TOP 1

Physician's CHOICE Digestive Enzymes

Physician's CHOICE Digestive Enzymes Cover
Physician's CHOICE Digestive Enzymes - Multi Enzymes, Organic Prebiotics & Probiotics for Digestive Health & Gut Health - Meal Time Discomfort Relief & Bloating - Dual Action Approach - 60 CT

Physician's CHOICE Enzymes is a powerful digestive health supplement designed to provide relief from mealtime discomfort. With 16 beneficial enzymes, it helps digest proteins, carbs, fruits, veggies, beans, dairy, and fats, making it suitable for all diets. The dual action approach combines digestive enzymes with prebiotics and probiotics to promote healthy digestion and gut function. The probiotics in this supplement are specially selected for their ability to survive the harsh gut environment, and the organic prebiotics fuel the growth of healthy bacteria in the gut. Crafted based on scientific research, Physician's CHOICE Enzymes are 3rd-party tested for purity and potency, ensuring a safety assured standard of quality. Take control of your digestive health with Physician's CHOICE Enzymes.

What We Like
Relieves mealtime discomfort
Promotes digestive health
Contains organic prebiotics and probiotics
#TOP 2

Zenwise Probiotic Digestive Multi Enzymes

ZNW00734
Off-white
Zenwise Probiotic Digestive Multi Enzymes Cover
Zenwise Health Digestive Enzymes for Gut Health - Probiotic Multi Enzymes with Prebiotics and Probiotics for Women and Men for Digestive Health and Bloating Relief, Daily Enzymes for Digestion -180 CT

Zenwise Health's Probiotic Digestive Multi Enzymes is a pre-meal plant-powered pill formulated to help women and men find relief from occasional bloating, gas, and discomfort. This advanced enzyme + prebiotic, probiotic non-GMO formula tackles hard-to-digest foods and is clinically proven to be reliably alive. It contains botanical bounty such as turmeric, ginger, green papaya, inulin, apple pectin, bladderwrack, fennel, and wakame to aid gut health and stomach comfort. Each bottle contains 180 capsules, and it is suggested to take one capsule before each meal.

What We Like
Relieves bloating
Improves digestion
Supports gut health
Effective for individuals with IBS
Helps with gas and constipation
#TOP 3

Carlyle Digestive Enzymes with 14 Probiotic Strains

CL4405
Carlyle Digestive Enzymes with 14 Probiotic Strains Cover
Carlyle Digestive Enzymes | with Probiotics & Prebiotics | 180 Capsules | Non-GMO and Gluten Free Supplement for Men & Women

Carlyle Digestive Enzymes with 14 Probiotic Strains is a non-GMO and gluten-free supplement that provides full-spectrum digestive support. It contains bromelain and comes in quick-release capsules that can be taken before or after meals. Customers have reported improved regularity and reduced bloating and stomach pain. Some customers have not seen the desired results.

What We Like
Non-GMO and gluten-free
Full-spectrum digestive support
Quick-release capsules
Improved regularity and reduced bloating and stomach pain

Wholesome Wellness Digestive Enzymes

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Green
Wholesome Wellness Digestive Enzymes Cover
Wholesome Wellness Digestive Enzymes 1000MG Plus Prebiotics & Probiotics Supplement, 180 Capsules, Organic Plant-Based Vegan Formula for Digestion & Lactose with Amylase & Bromelain,3-6 Months Supply

Wholesome Wellness Digestive Enzymes is a plant-based, organic supplement that helps improve digestion and gut health. With a 1000 MG dose of clinical grade digestive enzymes and a 10 billion CFU 10 strain probiotic with prebiotics, this supplement provides relief from bloating, flatulence, fat, pancreatic, and bowel cleansing. The Advanced Multi Enzyme System helps digest a variety of foods, including fried, spicy, raw, processed food, dairy, protein, salts, carb / carbohydrate, vitamin and acidic diet fruits and veggies. The supplement also contains a powerful 10 billion CFU dose of 10 different probiotic strains clinically shown to enhance preventions & immune system response.

What We Like
Relieves bloating and constipation
Plant-based vegan formula
Improves gut health
May enhance sleep, digestion, and energy

NatureBell Digestive Enzymes with Probiotics

BA-NB-DE240C
NatureBell Digestive Enzymes with Probiotics Cover
NatureBell Digestive Enzymes with Probiotics and Prebiotics, 240 Veggie Capsules | Gut & Digestive Health Support – 20 Enzyme & 5 Prebiotic Pancreatic Enzyme Complex | Non-GMO, Vegan Friendly

NatureBell Digestive Enzymes offers a comprehensive blend of digestive support in a convenient veggie capsule. With 240 capsules in a bottle, you can enjoy an 8-month supply, making it easy to incorporate into your daily routine. Each serving combines 20 digestive enzymes and 5 prebiotics, promoting better digestion and nutrient absorption. This unique formulation helps to alleviate bloating and supports overall gut health. Designed for both men and women, it aims to enhance your digestive balance and keep your gut flora thriving.

What We Like
Long-lasting 8-month supply
Supports digestion and nutrient absorption
Helps reduce bloating
Non-GMO and vegan-friendly

Codeage Digestive Enzymes Supplement

Fermented Enzymes
Codeage Digestive Enzymes Supplement Cover
Codeage Fermented Digestive Enzymes Supplement 3-Month Supply - 14 Digestive Enzymes, Probiotics, Prebiotics, Fermented Botanicals, Plant-Based Multi Pancreatic Enzymes - 1 Capsule a Day - 90 Capsules

Codeage Digestive Enzymes Supplement is an all-in-one digestive enzymes solution featuring raw & vegan digestive enzymes paired with probiotics, prebiotics, fermented botanical fruits, and herbs. It contains 14 enzymes, a fermented organic botanical blend, and a probiotics blend of 4 different strains. It is made with non-GMO ingredients in the USA in a cGMP certified facility and is vegan and contains no soy, gluten, milk, egg, wheat, shellfish, color additives, or preservatives.

What We Like
Contains 14 enzymes
Organic botanical blend
Probiotics blend
Vegan & Non-GMO
#TOP 7

Digestive Enzymes with Probiotics & Prebiotics

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Dark Amber Bottle
Digestive Enzymes with Probiotics & Prebiotics Cover
Digestive Enzymes with Probiotics & Prebiotics - Digestive Enzyme Supplements w Lipase, Amylase, Bromelain - Support a Healthy Digestive Tract for Men and Women – 90 Vegetarian Capsules

Divine Bounty's Digestive Enzymes with Probiotics & Prebiotics is a potent, plant-based digestive enzyme formula for men and women. It contains 500mg of digestive enzymes in one capsule, along with prebiotics and probiotics, fortified with 6 essential vitamins. It is GMO free, soy free, gluten free and has no preservatives, stearates, silicone dioxide or artificial ingredients. Customers have reported improved digestion, less bloating, more frequent bowel movements, and no more constipation.

What We Like
More potent source of digestive enzymes
Added prebiotics & probiotics
Highest quality ingredients
Digestive enzymes & pre/probiotics
Made in the USA

Purely Optimal Digestive Enzymes Plus Prebiotics & Probiotics - 180 Capsules

Purely Optimal Digestive Enzymes Plus Prebiotics & Probiotics - 180 Capsules Cover
Purely Optimal Digestive Enzyme Supplement - Comprehensive Gut Health Support with 12 Enzymes, Probiotics & Prebiotics - Relief for Bloating, Gas & Digestive Discomfort - 180 Capsules

Beat your digestive problems with Purely Optimal Digestive Enzymes supplement. It contains 12 powerful enzymes to ease discomfort, improve nutrient absorption, and promote better digestion. Packed with prebiotics, probiotics, and wholefoods enzymes, it helps to reduce bloating, constipation, IBS, and indigestion. Made in the USA in a GMP certified facility, it's 3rd party lab tested for safety and quality. Plus, your purchase contributes to life-saving vitamins and minerals for children and mothers in need through their partnership with Vitamin Angels.

What We Like
Contains 12 powerful enzymes to ease discomfort and improve nutrient absorption
Packed with prebiotics, probiotics, and wholefoods enzymes to reduce bloating, constipation, IBS, and indigestion
Made in the USA in a GMP certified facility and 3rd party lab tested for safety and quality
Your purchase contributes to life-saving vitamins and minerals for children and mothers in need through their partnership with Vitamin Angels

Digestive Enzymes with Probiotics - Multi-Enzyme Supplement for Digestive Health

NNDigestiveEnzyme
Digestive Enzymes with Probiotics - Multi-Enzyme Supplement for Digestive Health Cover
Digestive Enzymes with Probiotics - Probiotic Multi Enzymes with Probiotics and Prebiotics for Digestive Health and Bloating Relief for Women and Men, Daily Enzymes for Gut & Digestion - 120 Capsules

Nature's Nutrition Digestive Enzymes with Probiotics is an advanced enzyme probiotic formula that supports digestion and gut health. The advanced enzyme blend replenishes digestive enzymes that may decline with age, helping to break down carbohydrates, protein, dairy, and fried foods. The proprietary Makzyme blend ensures better delivery and survivability of enzymes and probiotics. The trusted formula is third-party tested for quality and purity, and it follows strict cGMP guidelines. With bromelain as a special ingredient, this vegan and non-GMO supplement is perfect for women and men who suffer from bloating and need digestive support.

What We Like
Advanced enzyme probiotic formula supports digestion and gut health
Replenishes digestive enzymes that may decline with age
Proprietary Makzyme blend ensures better delivery and survivability of enzymes and probiotics
#TOP 10

Physician's CHOICE Digestive Enzymes

Physician's CHOICE Digestive Enzymes Cover
Physician's CHOICE Digestive Enzymes - Multi Enzymes, Bromelain, Organic Prebiotics & Probiotics for Digestive Health & Gut Health - Bloating & Meal Time Discomfort - Dual Action - All Diets - 30 CT

Physician's CHOICE Enzymes is a powerful digestive supplement that provides a dual action approach to relieve mealtime discomfort and promote digestive health. With 16 beneficial enzymes, it effectively breaks down proteins, carbs, fruits, veggies, beans, dairy, and fats, making it suitable for diverse diets. The inclusion of SBO Probiotics and Prebiotics further aids digestion and promotes a healthy gut. The three soil-based probiotic strains in this product are specifically selected for their ability to survive the harsh gut environment. Along with organic prebiotics, they fuel the growth of healthy bacteria in the gut. Crafted based on scientific research and partnered with expert physicians, Physician's CHOICE Enzymes ensures safety and quality. Each bottle is 3rd-party tested for purity and potency, providing you with a reliable digestive health solution.

What We Like
Dual action relief
Includes SBO Probiotics & Prebiotics
Formulated with 3 soil-based probiotic strains
Buying Guide Image

Frequently Asked Questions (FAQs)

1. Can you take digestive enzymes with prebiotics?

If needed, it is totally safe to take digestive enzymes and probiotics together. In fact, some studies suggest that probiotics enhance the outcome of enzyme supplementation. It's important to choose a digestive enzyme appropriate for your needs, based on your symptoms and the foods that your body is sensitive to.

2. Is a digestive enzyme the same as a prebiotic?

Digestive enzymes are normally produced by the body whereas prebiotics are not produced by the body but rather ingested.

3. Can I take enzymes and probiotics together?

As probiotics and digestive enzymes are different things and perform different jobs, it is absolutely fine to take them together.

4. Is it better to take probiotics or digestive enzymes?

Both affect your digestion, but in very different ways. Probiotics are live organisms that make up the good bacteria in your gut. They help keep your digestive tract healthy, so they support the work your enzymes do. Unlike enzymes, probiotics do not have the ability to break down or digest food components.

Editor's Notes

During our prebiotic enzyme supplement research, we found 24 prebiotic enzyme supplement products and shortlisted 10 quality products. We collected and analyzed 394,795 customer reviews through our big data system to write the prebiotic enzyme supplements list. We found that most customers choose prebiotic enzyme supplements with an average price of $19.63.

The prebiotic enzyme supplements are available for purchase. We have researched hundreds of brands and picked the top brands of prebiotic enzyme supplements, including Physician's CHOICE, Zenwise Health, Carlyle, Wholesome Wellness, NatureBell. The seller of top 1 product has received honest feedback from 8,346 consumers with an average rating of 4.9.

Written by
Elisa Drew Avatar

Elisa Drew is a really professional copywriter specializing in baby products with five years of experience working as a pediatrician once. She has published a series of baby books purchased by over thirty thousand people in the United States.